CH ELM (R4)
1.14.0 - release CH

This page is part of the Observations of notifiable communicable infectious diseases (v1.14.0: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions

Table of Contents

.. 0 Table of Contents
... 1 Home
... 2 FHIR Document (Bundle)
... 3 Logical Model
... 4 Use Case
... 5 Guidance
... 6 Profiles
... 7 Extensions
... 8 API
... 9 Terminology
... 10 Changelog
... 11 Business Rules
... 12 Artifacts Summary
.... 12.1 FOPH CapabilityStatement for receiving laboratory reports
.... 12.2 SearchParameter-ch-elm-status
.... 12.3 CH ELM Laboratory Report
.... 12.4 CH ELM Composition: Laboratory Report
.... 12.5 CH ELM Composition: Laboratory Report Strict
.... 12.6 CH ELM DiagnosticReport: Laboratory Report
.... 12.7 CH ELM Document: Laboratory Report
.... 12.8 CH ELM Document: Laboratory Report (strict)
.... 12.9 CH ELM Observation Component Results: Concentration
.... 12.10 CH ELM Observation Results for Genotyping
.... 12.11 CH ELM Observation Results for Genotyping (strict)
.... 12.12 CH ELM Observation Results for HIV Recency Testing (strict)
.... 12.13 CH ELM Observation Results for Microbial susceptibility tests
.... 12.14 CH ELM Observation Results for Microbial susceptibility tests (strict)
.... 12.15 CH ELM Observation Results for Microbiology studies (set)
.... 12.16 CH ELM Observation Results for Microbiology studies (set) strict
.... 12.17 CH ELM Observation Results: Laboratory
.... 12.18 CH ELM Observation Results: Ratio
.... 12.19 CH ELM Observation Results: Text
.... 12.20 CH ELM Observation Results: Viral Load
.... 12.21 CH ELM Organization: Author
.... 12.22 CH ELM Organization: Lab
.... 12.23 CH ELM Organization: Orderer
.... 12.24 CH ELM Patient
.... 12.25 CH ELM Patient HIV
.... 12.26 CH ELM Patient Initials
.... 12.27 CH ELM Patient VCT
.... 12.28 CH ELM Practitioner: Orderer
.... 12.29 CH ELM PractitionerRole: Orderer
.... 12.30 CH ELM ServiceRequest: Laboratory Order
.... 12.31 CH ELM ServiceRequest: Laboratory Order
.... 12.32 CH ELM Specimen: Laboratory
.... 12.33 DocumentReference for Publish Response
.... 12.34 DocumentReference for sending the report
.... 12.35 DocumentReference for sending the report with strict validation
.... 12.36 Find Document References Response message
.... 12.37 CH ELM CodeableConcept
.... 12.38 CH ELM Coding
.... 12.39 CH ELM Quantity arb'U
.... 12.40 Human Name
.... 12.41 IDN Identifier
.... 12.42 CH ELM Extension: Department
.... 12.43 CH ELM Extension: HIV code
.... 12.44 CH ELM Extension: VCT code
.... 12.45 Status of the processing of the document
.... 12.46 CH ELM Expecting Organism Specification
.... 12.47 CH ELM Expecting Specimen Specification
.... 12.48 CH ELM FOPH Patient Name Representation
.... 12.49 CH ELM Interpretation Codes AVIDITY
.... 12.50 CH ELM Interpretation Codes Positive
.... 12.51 CH ELM Interpretation Codes Positive and Negative
.... 12.52 CH ELM Interpretation Codes Resistant
.... 12.53 CH ELM Interpretation Codes Resistant and Susceptible
.... 12.54 CH ELM Interpretation Codes SERO
.... 12.55 CH ELM Interpretation Codes TITER
.... 12.56 CH ELM Interpretation Codes Vs
.... 12.57 CH ELM Lab Study Types
.... 12.58 CH ELM Observation Profile Vs
.... 12.59 CH ELM Results Antibiotic Tb
.... 12.60 CH ELM Results Bru Org
.... 12.61 CH ELM Results Camp Org
.... 12.62 CH ELM Results Chol Org
.... 12.63 CH ELM Results Cjd Org
.... 12.64 CH ELM Results Coded Values Laboratory
.... 12.65 CH ELM Results Complete Spec
.... 12.66 CH ELM Results Completion Vs
.... 12.67 CH ELM Results Component Antibiotic for CPE
.... 12.68 CH ELM Results Component Gene CPE
.... 12.69 CH ELM Results Component Vs
.... 12.70 CH ELM Results Diph Org
.... 12.71 CH ELM Results Ehec Tox Org
.... 12.72 CH ELM Results Gene Tb
.... 12.73 CH ELM Results Geni Spec
.... 12.74 CH ELM Results Haem Org
.... 12.75 CH ELM Results Hanta Org
.... 12.76 CH ELM Results HIV Recency
.... 12.77 CH ELM Results Influenza Hxny Org
.... 12.78 CH ELM Results Laboratory Observation
.... 12.79 CH ELM Results Laboratory Observation Complete
.... 12.80 CH ELM Results Laboratory Observation Genotyping
.... 12.81 CH ELM Results Laboratory Observation Susceptibility
.... 12.82 CH ELM Results Leg Org
.... 12.83 CH ELM Results Lis Org
.... 12.84 CH ELM Results Lis Spec
.... 12.85 CH ELM Results Mal Org
.... 12.86 CH ELM Results Maldi-tof Org
.... 12.87 CH ELM Results Mea Org
.... 12.88 CH ELM Results Men Org
.... 12.89 CH ELM Results Mpox Org
.... 12.90 CH ELM Results Pneu Org
.... 12.91 CH ELM Results Sal Org
.... 12.92 CH ELM Results Sal Org Complete
.... 12.93 CH ELM Results Shi Nent Org
.... 12.94 CH ELM Results Shi Org
.... 12.95 CH ELM Results Sterile Spec
.... 12.96 CH ELM Results Tub Org
.... 12.97 CH ELM Results Tul Org
.... 12.98 CH ELM Results Virus Cult Org
.... 12.99 CH ELM Status
.... 12.100 CH ELM FOPH Business Rules
.... 12.101 CH ELM FOPH Code Reserve
.... 12.102 CH ELM FOPH Patient Name Representation
.... 12.103 CH ELM Interpretation Codes Vs
.... 12.104 CH ELM Observation Profile Vs
.... 12.105 CH ELM Results Completion Vs
.... 12.106 CH ELM Results Component Vs
.... 12.107 IDN Liechtenstein
.... 12.108 CH ELM Expecting Organism Specification To Results Completion Vs
.... 12.109 CH ELM Expecting Specimen Specification To Results Completion Vs
.... 12.110 CH ELM Results Genotype To Component Code
.... 12.111 CH ELM Results Genotyping To Component Interpretation Code
.... 12.112 CH ELM Results Susceptibility To Component Code
.... 12.113 CH ELM Results Susceptibility To Component Interpretation Code
.... 12.114 CH ELM Results Susceptibility To Component Observation Profile
.... 12.115 CH ELM Results To FOPH Patient Name Representation
.... 12.116 CH ELM Results To Interpretation Code
.... 12.117 CH ELM Results To Observation Profile
.... 12.118 1 Doc - Neisseria Gonorrhoeae
.... 12.119 10Doc - Legionella
.... 12.120 11Doc - Malaria
.... 12.121 12Doc - Mpox
.... 12.122 13Doc - Shigella
.... 12.123 14Doc - Neisseria meningitidis - confirmation test
.... 12.124 14Doc - Neisseria meningitidis - confirmation test with original order
.... 12.125 15Doc - Measles Seroconversion
.... 12.126 16Doc - Dengue Titer
.... 12.127 17Doc - Neisseria meningitidis – microscopic finding
.... 12.128 18Doc - Corynebacterium diphtheriae
.... 12.129 19Doc - Streptococcus pneumoniae
.... 12.130 1bComp - Neisseria Gonorrhoeae
.... 12.131 1bDoc - Neisseria Gonorrhoeae
.... 12.132 1bDR - Neisseria Gonorrhoeae
.... 12.133 1bObs - Neisseria Gonorrhoeae
.... 12.134 1bOrg - Broker
.... 12.135 1bOrg - Labor
.... 12.136 1bSpec - Neisseria Gonorrhoeae
.... 12.137 1bSR - Order
.... 12.138 1cDR - Neisseria Gonorrhoeae
.... 12.139 1Comp - Neisseria Gonorrhoeae
.... 12.140 1cSR - Order
.... 12.141 1Doc - Neisseria Gonorrhoeae
.... 12.142 1DR - Neisseria Gonorrhoeae
.... 12.143 1Obs - Neisseria Gonorrhoeae
.... 12.144 1Org - Kantonsspital ABC
.... 12.145 1Org - Labor
.... 12.146 1Pat - DM
.... 12.147 1PR - Monika Giacometti @ Kantonsspital ABC
.... 12.148 1PR - Monika Giacometti @ Kantonsspital ABC
.... 12.149 1Pract - Giacometti
.... 12.150 1Pract - Monika Giacometti
.... 12.151 1Spec - Neisseria Gonorrhoeae
.... 12.152 1SR - Order
.... 12.153 20Doc - Vibrio cholerae
.... 12.154 21Doc - Hepatite E
.... 12.155 22Doc - Haemophilus influenzae
.... 12.156 23Doc - Francisella tularensis with organism specification
.... 12.157 24Doc - Chikungunya fever
.... 12.158 25Doc - Tick-borne encephalitis
.... 12.159 26Doc - Hepatite A
.... 12.160 28Doc - Listeria monocytogenes
.... 12.161 29Doc - Rubella
.... 12.162 2Doc - Chlamydia Trachomatis
.... 12.163 2Doc - Chlamydia Trachomatis (VCT Deprecated)
.... 12.164 2Doc - Chlamydia Trachomatis (VCT)
.... 12.165 30Doc - Salmonella enteritidis
.... 12.166 32Doc - Rubella avidity
.... 12.167 33Doc - Salmonella valueString
.... 12.168 34Doc - Brucella
.... 12.169 35Doc CJD
.... 12.170 36Doc - Salmonella paratyphi
.... 12.171 37Doc - Zika
.... 12.172 38Doc - Anthrax
.... 12.173 39Doc - Botulism
.... 12.174 40Doc - Crimean-Congo
.... 12.175 41Doc - Ebola
.... 12.176 42Doc - Lassa
.... 12.177 43Doc - Marburg
.... 12.178 44Doc - MERS-CoV
.... 12.179 45Doc - SARS-CoV
.... 12.180 46Doc - Yersinia pestis
.... 12.181 47Doc - Variola
.... 12.182 48Doc - Mpox Clade
.... 12.183 49Doc - HIV
.... 12.184 4Doc - Campylobacter coli
.... 12.185 50Doc - HIV-viremia
.... 12.186 51Doc - Gelbfieber
.... 12.187 52Doc - Hantavirus
.... 12.188 53Doc - Influenza HxNy
.... 12.189 54Doc - Poliomyelitis
.... 12.190 55Doc - Tollwut
.... 12.191 56Doc - Trichinella spiralis
.... 12.192 57Doc - West Nile
.... 12.193 58Doc - Coxiella
.... 12.194 59Doc - EHEC
.... 12.195 5Doc - Treponema pallidum
.... 12.196 61Doc - Tuberculosis Susceptibility
.... 12.197 63Doc - Tuberculosis Genotyping
.... 12.198 65Doc-Tuberculosis
.... 12.199 66Doc - HIV Recency
.... 12.200 67Doc-Emerging-Pathogen
.... 12.201 6Doc - Influenza
.... 12.202 7Doc - SARS-CoV-2
.... 12.203 8Doc - HepatiteB
.... 12.204 9Doc - HepatiteC
.... 12.205 Carbapenemase-producing Enterobacteriaceae
.... 12.206 Chlamydia - Patient missing birthdate
.... 12.207 Chlamydia - Patient missing name.given
.... 12.208 Chlamydia - Patient with partial birthdate
.... 12.209 Example Document with unknown patient name and birthdate
.... 12.210 Example of a Find Document References Response Message
.... 12.211 Org - Hôpital régional soleil
.... 12.212 Org - Praxis Dr. Hauser
.... 12.213 Org: Orderer with BER and UIDB
.... 12.214 Pat - Antoine Dupont
.... 12.215 Pat - Antoine Dupont (partial birthdate)
.... 12.216 Pat - Antoine Dupont (unknown birthdate)
.... 12.217 Pat - Antoine Dupont (unknown name)
.... 12.218 Pat - Ernst Karl Tanner
.... 12.219 Pat - ET
.... 12.220 Pat - HIV
.... 12.221 Pat - Lilly Liechtenstein
.... 12.222 Pat - VCT with extension (deprecated)
.... 12.223 Pat - VCT with localpid
.... 12.224 PR - Jeanne Moreau @ Hôpital régional soleil
.... 12.225 PR - Peter Hauser @ Praxis Dr. Hauser
.... 12.226 Pract - Jeanne Moreau
.... 12.227 Pract - Peter Hauser
.... 12.228 Publish 1cDoc-NeisseriaGonorrhoeae (Strict)
.... 12.229 Publish 1Doc-NeisseriaGonorrhoeae
.... 12.230 Publish 1Doc-NeisseriaGonorrhoeae (Strict)
.... 12.231 Publish 2Doc-ChlamydiaTrachomatis (Strict)
.... 12.232 Publish 2Doc-ChlamydiaTrachomatis (Strict)
.... 12.233 Publish 2Doc-ChlamydiaTrachomatis with Patient VCT Code
.... 12.234 Publish 2Doc-ChlamydiaTrachomatis with Patient VCT Code (Strict)
.... 12.235 Publish 4Doc-Campylobacter
.... 12.236 Publish 5Doc-TreponemaPallidum
.... 12.237 Publish 6Doc-Influenza
.... 12.238 Publish 7Doc-SARSCoV2
.... 12.239 Publish Response for Neisseria Gonorhoeae completed
.... 12.240 Publish Response for Neisseria Gonorhoeae failed
.... 12.241 Publish Response for Neisseria Gonorhoeae in progress
.... 12.242 Test100-Kosovo
.... 12.243 Test101-InvalidCountryCode
.... 12.244 Test102-BirthDateFuture
.... 12.245 Test92 - Warning for Ber Uid and Gln
.... 12.246 Test92 Bundle - Bundle provoking warning for Ber Uid and Gln
.... 12.247 Test93 Bundle - DocumentReference with contained Bundle provoking error for full name for Influenca (must be initials)
.... 12.248 Test93 Error if full name is provided by Influenca (should be initials)
.... 12.249 Test94 - If warning is ignored for Binding for path (.+) has no source
.... 12.250 Test95-Ignore-Observation-Interpretation-Codes-Warning
.... 12.251 Test96-Ignore-Slice-Patient-Eu-Lab-Information
.... 12.252 Test97 Bundle - Coxiella without titer ratio which should raise an error
.... 12.253 Test97-CoaxiellaNoRatio
.... 12.254 Test98 - Verify that error for invalid hiv code is raised
.... 12.255 Test99 Bundle - Coxiella without zero denominator should raise an error
.... 12.256 Test99-CoaxiellaZeroDenominator
.... 12.257 Test100-Bundle-Kosovo
.... 12.258 Test101-Bundle-InvalidCountryCode
.... 12.259 Test102-Bundle-BirthDateFuture
.... 12.260 Test98-Bundle-HivInvalidCode